Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm6987-201ENSMUST00000119319 428 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm14614-201ENSMUST00000119873 384 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm14900-201ENSMUST00000120304 733 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm25057-201ENSMUST00000157366 88 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm23756-201ENSMUST00000157582 114 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm23968-201ENSMUST00000175047 125 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm27782-201ENSMUST00000185059 199 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm38280-201ENSMUST00000192610 158 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm45196-201ENSMUST00000206751 825 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm23238-201ENSMUST00000083007 164 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim9Q8C7M3 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm25760-201ENSMUST00000103989 132 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm13604-201ENSMUST00000119332 482 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm11545-201ENSMUST00000146507 375 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm23071-201ENSMUST00000158242 115 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm8609-201ENSMUST00000182967 998 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm27299-201ENSMUST00000184593 103 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm29036-201ENSMUST00000189967 877 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm44892-201ENSMUST00000208595 488 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm24036-201ENSMUST00000082868 156 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim9Q8C7M3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim9Q8C7M3 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms