Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm25574-201ENSMUST00000175245 249 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm24465-201ENSMUST00000178398 107 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm27001-201ENSMUST00000182252 936 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm21392-201ENSMUST00000182950 972 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm27617-201ENSMUST00000184321 168 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm28114-201ENSMUST00000187232 379 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm28117-201ENSMUST00000188472 371 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm28665-201ENSMUST00000189269 670 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm37966-201ENSMUST00000193122 326 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm9357-201ENSMUST00000207138 805 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm9685-201ENSMUST00000211275 538 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 AW822073-201ENSMUST00000075305 555 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Mir708-201ENSMUST00000102189 109 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm15310-201ENSMUST00000117891 372 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm24442-201ENSMUST00000157238 327 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm16138-201ENSMUST00000159341 821 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm22702-201ENSMUST00000175372 69 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29048-201ENSMUST00000185342 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29403-201ENSMUST00000185491 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28234-201ENSMUST00000185657 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28248-201ENSMUST00000186093 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29633-202ENSMUST00000186217 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28829-201ENSMUST00000186231 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28261-201ENSMUST00000186417 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28815-201ENSMUST00000186751 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28608-201ENSMUST00000186860 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28122-201ENSMUST00000187088 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28420-201ENSMUST00000187340 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28106-201ENSMUST00000187640 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28698-201ENSMUST00000187734 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29224-201ENSMUST00000187965 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29189-201ENSMUST00000188018 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29476-201ENSMUST00000188397 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29505-201ENSMUST00000188424 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28125-201ENSMUST00000188470 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29391-201ENSMUST00000188545 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29280-201ENSMUST00000188571 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28349-201ENSMUST00000188590 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29652-201ENSMUST00000188622 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28819-206ENSMUST00000188816 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29079-201ENSMUST00000188875 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28213-201ENSMUST00000189183 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29382-201ENSMUST00000189549 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29377-205ENSMUST00000189603 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28327-201ENSMUST00000189638 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28790-201ENSMUST00000189642 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28907-201ENSMUST00000189700 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29586-207ENSMUST00000189745 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29115-201ENSMUST00000189870 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28366-201ENSMUST00000190147 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29212-201ENSMUST00000190384 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29533-201ENSMUST00000190403 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28162-201ENSMUST00000190545 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm29030-201ENSMUST00000190848 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28742-201ENSMUST00000191001 615 ntBASIC6.93□□□□□ -1.3
Ccdc40Q8BI79 Gm28899-201ENSMUST00000191161 615 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms