Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm30155-201ENSMUST00000223458 339 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 AC156803.1-201ENSMUST00000224407 820 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 AC167669.3-201ENSMUST00000224720 393 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Olfr197-201ENSMUST00000080031 926 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm26107-201ENSMUST00000083972 107 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm42597-201ENSMUST00000196663 1544 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm37618-201ENSMUST00000192891 3075 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm25757-201ENSMUST00000103986 123 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm15129-201ENSMUST00000119673 279 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm23762-201ENSMUST00000158348 106 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Mir7212-201ENSMUST00000184098 61 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm37550-201ENSMUST00000193230 463 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Ighv1-29-201ENSMUST00000194116 342 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm5050-201ENSMUST00000197164 775 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 AC120011.1-201ENSMUST00000202147 744 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm19596-201ENSMUST00000203685 739 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm44088-201ENSMUST00000204595 237 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm20074-201ENSMUST00000208144 484 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm19709-201ENSMUST00000215403 482 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm18972-201ENSMUST00000218873 630 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm10108-201ENSMUST00000078246 319 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm37140-201ENSMUST00000192914 1684 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Clcn1Q64347 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clcn1Q64347 Gm12346-201ENSMUST00000121455 2255 ntBASIC9.66□□□□□ -0.86
Clcn1Q64347 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Clcn1Q64347 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Dennd6a-203ENSMUST00000224111 2692 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC9.65□□□□□ -0.86
Clcn1Q64347 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm16057-201ENSMUST00000120811 759 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm13495-201ENSMUST00000121156 537 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm15116-201ENSMUST00000122248 663 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm16134-201ENSMUST00000161714 336 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms