Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.54□□□□□ -1.04
Smarcc1P97496 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smarcc1P97496 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm15161-201ENSMUST00000117340 387 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm14712-201ENSMUST00000120195 772 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm6446-201ENSMUST00000120604 818 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm14587-201ENSMUST00000121714 658 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm25295-201ENSMUST00000122794 306 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm3076-201ENSMUST00000161613 451 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm25246-201ENSMUST00000175476 69 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm20615-201ENSMUST00000177503 705 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Mir7235-201ENSMUST00000183796 56 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Mir7653-201ENSMUST00000184358 61 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm45448-201ENSMUST00000211739 209 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 AC174797.4-201ENSMUST00000225510 347 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.53□□□□□ -1.04
Smarcc1P97496 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.53□□□□□ -1.04
Smarcc1P97496 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smarcc1P97496 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Smarcc1P97496 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm24888-201ENSMUST00000104387 130 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm24380-201ENSMUST00000122696 324 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm9274-201ENSMUST00000182505 984 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Mir7020-201ENSMUST00000183787 70 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm18839-201ENSMUST00000204292 670 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm44603-201ENSMUST00000206820 367 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8.52□□□□□ -1.05
Smarcc1P97496 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm35619-201ENSMUST00000222548 600 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm10145-201ENSMUST00000077776 462 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm24695-201ENSMUST00000083877 83 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm10705-201ENSMUST00000098980 461 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Smarcc1P97496 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.52□□□□□ -1.05
Smarcc1P97496 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.52□□□□□ -1.05
Smarcc1P97496 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Smarcc1P97496 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Smarcc1P97496 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Smarcc1P97496 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.51□□□□□ -1.05
Smarcc1P97496 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Smarcc1P97496 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Smarcc1P97496 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms