Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.23□□□□□ -1.25
CiitaP79621 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm24173-201ENSMUST00000104130 128 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm13455-201ENSMUST00000118767 517 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm14603-201ENSMUST00000121275 448 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm13669-201ENSMUST00000122366 457 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm18447-201ENSMUST00000187501 307 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm21728-201ENSMUST00000188442 695 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm21889-201ENSMUST00000188487 695 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm20932-201ENSMUST00000189115 694 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CiitaP79621 Gm21920-201ENSMUST00000190042 695 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Gm18781-201ENSMUST00000211252 924 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.22□□□□□ -1.25
CiitaP79621 Gm7413-201ENSMUST00000219498 462 ntBASIC7.22□□□□□ -1.25
CiitaP79621 A1cf-203ENSMUST00000224400 1204 ntBASIC7.22□□□□□ -1.25
CiitaP79621 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.22□□□□□ -1.25
CiitaP79621 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CiitaP79621 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CiitaP79621 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CiitaP79621 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CiitaP79621 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CiitaP79621 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.22□□□□□ -1.25
CiitaP79621 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CiitaP79621 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.25
CiitaP79621 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
CiitaP79621 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CiitaP79621 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CiitaP79621 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CiitaP79621 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CiitaP79621 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CiitaP79621 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CiitaP79621 Gm11504-201ENSMUST00000120211 173 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.21□□□□□ -1.26
CiitaP79621 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.21□□□□□ -1.26
CiitaP79621 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CiitaP79621 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CiitaP79621 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.21□□□□□ -1.26
CiitaP79621 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CiitaP79621 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.21□□□□□ -1.26
CiitaP79621 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Gm37380-201ENSMUST00000193752 397 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Gm43160-201ENSMUST00000196453 421 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Gm7986-201ENSMUST00000221336 551 ntBASIC7.21□□□□□ -1.26
CiitaP79621 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.21□□□□□ -1.26
CiitaP79621 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CiitaP79621 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CiitaP79621 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CiitaP79621 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CiitaP79621 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CiitaP79621 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CiitaP79621 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CiitaP79621 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CiitaP79621 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms