Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmgb1P63158 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Hmgb1P63158 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmgb1P63158 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hmgb1P63158 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm17170-201ENSMUST00000112785 316 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm15484-201ENSMUST00000118871 828 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm11371-201ENSMUST00000120294 385 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm15188-201ENSMUST00000121264 704 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm12321-201ENSMUST00000121485 804 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm23079-201ENSMUST00000157847 117 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm26352-201ENSMUST00000158223 125 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm24057-201ENSMUST00000158616 302 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Mir3072-201ENSMUST00000175610 83 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm18484-201ENSMUST00000204389 991 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.72□□□□□ -1.17
Hmgb1P63158 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 A1cf-203ENSMUST00000224400 1204 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 AC158388.1-201ENSMUST00000225441 256 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm24917-201ENSMUST00000083935 104 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.72□□□□□ -1.17
Hmgb1P63158 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.72□□□□□ -1.17
Hmgb1P63158 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmgb1P63158 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Hmgb1P63158 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Hmgb1P63158 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
Hmgb1P63158 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Hmgb1P63158 CT009480.3-201ENSMUST00000224051 3032 ntBASIC7.71□□□□□ -1.17
Hmgb1P63158 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.71□□□□□ -1.17
Hmgb1P63158 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Hmgb1P63158 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Hmgb1P63158 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Hmgb1P63158 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Hmgb1P63158 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC7.71□□□□□ -1.18
Hmgb1P63158 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.71□□□□□ -1.18
Hmgb1P63158 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.71□□□□□ -1.18
Hmgb1P63158 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmgb1P63158 Mir378d-201ENSMUST00000184232 110 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm5261-201ENSMUST00000185860 713 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm43390-201ENSMUST00000196614 421 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm45078-201ENSMUST00000205343 546 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm45198-201ENSMUST00000206796 591 ntBASIC7.71□□□□□ -1.18
Hmgb1P63158 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.71□□□□□ -1.18
Hmgb1P63158 Gm5176-201ENSMUST00000218244 1227 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms