Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
Col18a1P39061 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 Gm43684-201ENSMUST00000199279 6573 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 Gm22676-201ENSMUST00000116972 129 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC8.72□□□□□ -1.01
Col18a1P39061 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Mir199b-201ENSMUST00000175066 110 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 Gm27861-201ENSMUST00000183920 214 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 AC153522.1-201ENSMUST00000220047 1090 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 CT030170.4-202ENSMUST00000221109 540 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 AC154452.1-201ENSMUST00000225819 241 ntBASIC8.72□□□□□ -1.01
Col18a1P39061 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Col18a1P39061 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Col18a1P39061 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col18a1P39061 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col18a1P39061 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col18a1P39061 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col18a1P39061 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
Col18a1P39061 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC8.71□□□□□ -1.01
Col18a1P39061 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Gm24989-201ENSMUST00000104461 88 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Gm11894-201ENSMUST00000121579 328 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC8.71□□□□□ -1.01
Col18a1P39061 Gm22596-201ENSMUST00000157601 316 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.71□□□□□ -1.01
Col18a1P39061 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Gm2950-201ENSMUST00000185530 520 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC8.71□□□□□ -1.01
Col18a1P39061 Igkv4-75-201ENSMUST00000197204 359 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Trio-210ENSMUST00000227337 6375 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 AC116724.1-201ENSMUST00000227900 972 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Col18a1P39061 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col18a1P39061 Gm5832-201ENSMUST00000121704 1582 ntBASIC8.71□□□□□ -1.01
Col18a1P39061 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col18a1P39061 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Col18a1P39061 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Col18a1P39061 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Gm43323-201ENSMUST00000202328 4258 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col18a1P39061 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Col18a1P39061 Mir1192-201ENSMUST00000116976 121 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Gm14417-201ENSMUST00000120036 1074 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Gm6182-201ENSMUST00000156439 1208 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Gm23757-201ENSMUST00000158353 100 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Mir3080-201ENSMUST00000175010 79 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Col18a1P39061 Gm29664-201ENSMUST00000191125 463 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Gm7832-201ENSMUST00000202613 880 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC8.71□□□□□ -1.02
Col18a1P39061 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.71□□□□□ -1.02
Col18a1P39061 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col18a1P39061 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
Col18a1P39061 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms