Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.63□□□□□ -1.35
Hoxc11P31313 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxc11P31313 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxc11P31313 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxc11P31313 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxc11P31313 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.63□□□□□ -1.35
Hoxc11P31313 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Hoxc11P31313 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Hoxc11P31313 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Hoxc11P31313 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 AC163296.2-201ENSMUST00000220177 1315 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm12573-201ENSMUST00000118158 286 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm14158-201ENSMUST00000118409 308 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm15616-201ENSMUST00000118662 375 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm13532-201ENSMUST00000120373 240 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm25395-201ENSMUST00000157343 272 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm7281-201ENSMUST00000160010 543 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm27158-201ENSMUST00000183813 238 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm37439-201ENSMUST00000193150 856 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.62□□□□□ -1.35
Hoxc11P31313 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm3678-201ENSMUST00000218888 492 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 AU020206-202ENSMUST00000206358 3009 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.62□□□□□ -1.35
Hoxc11P31313 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxc11P31313 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Hoxc11P31313 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Mir760-201ENSMUST00000103257 119 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Snord88a-201ENSMUST00000116723 90 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm6451-201ENSMUST00000121488 717 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm6067-201ENSMUST00000121648 491 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm27018-201ENSMUST00000181136 225 ntBASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxc11P31313 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxc11P31313 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms