Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir6409-201ENSMUST00000184957 92 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Gm30196-201ENSMUST00000208957 160 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm45628-201ENSMUST00000210849 274 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Gm45756-201ENSMUST00000212491 407 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC5.26□□□□□ -1.57
Sdc1P18828 CT025639.2-201ENSMUST00000224440 1220 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 CT571271.1-201ENSMUST00000227071 670 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 AC125539.1-201ENSMUST00000227423 622 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC5.26□□□□□ -1.57
Sdc1P18828 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sdc1P18828 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sdc1P18828 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sdc1P18828 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sdc1P18828 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC5.26□□□□□ -1.57
Sdc1P18828 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 AC125487.1-201ENSMUST00000217888 1300 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sdc1P18828 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Rnu11-201ENSMUST00000104135 134 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm14382-201ENSMUST00000117374 437 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm12937-201ENSMUST00000118333 448 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm7113-201ENSMUST00000120477 958 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm12297-201ENSMUST00000121380 979 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm24576-201ENSMUST00000175508 248 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm28973-201ENSMUST00000189310 613 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm8009-201ENSMUST00000191672 436 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm37103-201ENSMUST00000191830 115 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm37511-201ENSMUST00000192901 294 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm18192-201ENSMUST00000210174 941 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sdc1P18828 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC5.25□□□□□ -1.57
Sdc1P18828 AC162940.1-201ENSMUST00000224745 1167 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 AC126939.4-201ENSMUST00000225360 743 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sdc1P18828 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sdc1P18828 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sdc1P18828 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Sdc1P18828 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Sdc1P18828 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.25□□□□□ -1.57
Sdc1P18828 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms