Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm14550-201ENSMUST00000117918 407 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Gm13735-201ENSMUST00000120217 670 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Gm11474-201ENSMUST00000120814 277 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm6081-201ENSMUST00000134472 489 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx1P18111 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm6061-201ENSMUST00000175860 492 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Gm27026-201ENSMUST00000183003 892 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Mir8094-201ENSMUST00000183361 117 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm2505-201ENSMUST00000200413 825 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx1P18111 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx1P18111 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.43□□□□□ -1.54
Cdx1P18111 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx1P18111 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cdx1P18111 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cdx1P18111 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cdx1P18111 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Cdx1P18111 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx1P18111 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Cdx1P18111 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Robo2-210ENSMUST00000226478 8059 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.42□□□□□ -1.54
Cdx1P18111 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm14904-201ENSMUST00000117067 335 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm13414-201ENSMUST00000117516 727 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm11880-201ENSMUST00000117612 399 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm13229-201ENSMUST00000118238 340 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm11653-201ENSMUST00000119992 1009 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm13214-201ENSMUST00000122137 408 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm26486-201ENSMUST00000158021 110 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm25989-201ENSMUST00000158761 133 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm21999-201ENSMUST00000165985 387 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm3611-201ENSMUST00000173687 877 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm20702-201ENSMUST00000176181 460 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdx1P18111 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm3841-201ENSMUST00000191399 451 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm5154-201ENSMUST00000203971 399 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm5305-201ENSMUST00000204010 746 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Gm45042-201ENSMUST00000207377 211 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Desi2-202ENSMUST00000069568 1193 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdx1P18111 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
Cdx1P18111 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms