Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm12879-201ENSMUST00000120003 1182 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm15224-201ENSMUST00000120501 388 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm6451-201ENSMUST00000121488 717 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm22326-201ENSMUST00000158897 351 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm20797-201ENSMUST00000177894 383 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Mir6239-201ENSMUST00000183564 105 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm29168-201ENSMUST00000189953 687 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm3678-201ENSMUST00000218888 492 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 AC154747.4-201ENSMUST00000224802 903 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 AC122356.2-201ENSMUST00000226962 820 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 AC130219.2-201ENSMUST00000228765 807 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm24451-201ENSMUST00000083353 133 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm25498-201ENSMUST00000104424 129 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm13265-201ENSMUST00000118090 421 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm12654-201ENSMUST00000120387 587 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm15187-201ENSMUST00000122329 264 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.26□□□□□ -1.57
Hmgb3O54879 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm17212-201ENSMUST00000166666 259 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm18848-201ENSMUST00000182069 792 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm37506-201ENSMUST00000192008 143 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm19739-201ENSMUST00000195941 153 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm43141-201ENSMUST00000199695 274 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm44931-201ENSMUST00000206056 545 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm18060-201ENSMUST00000207407 564 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm16475-202ENSMUST00000209033 528 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm8637-201ENSMUST00000212919 1085 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 AC154687.1-201ENSMUST00000224875 677 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Hmgb3O54879 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms