Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm23739-201ENSMUST00000102295 108 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm25919-201ENSMUST00000104271 132 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm26086-201ENSMUST00000157902 263 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm25374-201ENSMUST00000158158 101 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm37430-201ENSMUST00000193039 196 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm44795-201ENSMUST00000205496 319 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm5418-201ENSMUST00000206932 528 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Prkaa1-202ENSMUST00000228218 4618 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 AC164437.5-201ENSMUST00000227235 4414 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Robo2-210ENSMUST00000226478 8059 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm5841-201ENSMUST00000195307 2177 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm28377-201ENSMUST00000189695 720 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm45782-201ENSMUST00000212670 366 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm3266-201ENSMUST00000217832 591 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm18592-201ENSMUST00000221529 276 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Gm25515-201ENSMUST00000083858 157 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a4A2AX52 Dgkh-204ENSMUST00000227767 3319 ntBASIC5.55□□□□□ -1.52
Col6a4A2AX52 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Mir700-201ENSMUST00000102169 79 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm23440-201ENSMUST00000104299 130 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm6446-201ENSMUST00000120604 818 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Mir6348-201ENSMUST00000183804 120 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm4332-201ENSMUST00000196114 346 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm43354-201ENSMUST00000196862 346 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm5853-201ENSMUST00000197183 632 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm18103-201ENSMUST00000216621 779 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm9088-201ENSMUST00000220237 508 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 AC159301.1-202ENSMUST00000225860 2133 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.54□□□□□ -1.52
Col6a4A2AX52 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a4A2AX52 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms