Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm23756-201ENSMUST00000157582 114 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm20690-201ENSMUST00000177341 315 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm27295-201ENSMUST00000184264 153 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37380-201ENSMUST00000193752 397 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm42799-201ENSMUST00000201331 328 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm44265-201ENSMUST00000203631 465 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm43867-201ENSMUST00000203860 525 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm45196-201ENSMUST00000206751 825 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm31711-201ENSMUST00000220687 196 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm23054-201ENSMUST00000082804 162 ntBASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
H2afb2S4R1M3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm12573-201ENSMUST00000118158 286 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm14353-201ENSMUST00000122200 869 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm3810-201ENSMUST00000122413 476 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm8089-201ENSMUST00000122463 968 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm7289-201ENSMUST00000168993 734 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm9517-201ENSMUST00000195021 874 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm43396-201ENSMUST00000197506 706 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm4860-201ENSMUST00000200368 454 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm5324-201ENSMUST00000208115 476 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm2767-201ENSMUST00000209582 473 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
H2afb2S4R1M3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms