Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm11865-201ENSMUST00000118093 859 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm22035-201ENSMUST00000157284 228 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm23897-201ENSMUST00000158110 158 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm18417-201ENSMUST00000176564 648 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm6472-201ENSMUST00000178147 651 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm21171-201ENSMUST00000180048 673 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm27186-201ENSMUST00000184223 307 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm18727-201ENSMUST00000185981 553 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm38063-201ENSMUST00000193990 342 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm18971-201ENSMUST00000197240 374 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm2505-201ENSMUST00000200413 825 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm33626-201ENSMUST00000206790 828 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm45198-201ENSMUST00000206796 591 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm32899-201ENSMUST00000219694 207 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm18388-201ENSMUST00000222339 557 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 AC125019.1-201ENSMUST00000224809 908 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm43258-201ENSMUST00000200312 1950 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Gm37262-201ENSMUST00000192816 1818 ntBASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ube3bQ9ES34 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm7265-201ENSMUST00000192735 3502 ntBASIC9□□□□□ -0.97
Ube3bQ9ES34 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm19074-201ENSMUST00000218915 1429 ntBASIC9□□□□□ -0.97
Ube3bQ9ES34 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm12331-201ENSMUST00000119927 622 ntBASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm13024-201ENSMUST00000121756 718 ntBASIC9□□□□□ -0.97
Ube3bQ9ES34 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ube3bQ9ES34 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ube3bQ9ES34 Gm23633-201ENSMUST00000175293 119 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms