Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm15349-201ENSMUST00000121154 204 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm5166-201ENSMUST00000121332 573 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm11609-201ENSMUST00000121926 793 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm5871-201ENSMUST00000176461 718 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm8607-201ENSMUST00000221864 431 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Cdc40Q9DC48 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm12573-201ENSMUST00000118158 286 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm12242-201ENSMUST00000118824 738 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm5319-201ENSMUST00000118965 873 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm4992-201ENSMUST00000120256 768 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm12369-201ENSMUST00000121343 942 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm25717-201ENSMUST00000158631 353 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm6726-201ENSMUST00000172786 681 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm29663-201ENSMUST00000186962 853 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm37191-201ENSMUST00000193346 388 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm19088-201ENSMUST00000198800 566 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm9367-201ENSMUST00000205703 546 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Cdc40Q9DC48 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms