Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Mir582-201ENSMUST00000103758 81 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm14007-201ENSMUST00000118288 210 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm13815-201ENSMUST00000119963 412 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm14065-201ENSMUST00000120848 585 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm12881-201ENSMUST00000121191 203 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm5843-201ENSMUST00000121631 476 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm14848-201ENSMUST00000121850 467 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm8609-201ENSMUST00000182967 998 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm29184-201ENSMUST00000190038 334 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm38281-201ENSMUST00000192301 315 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm18955-201ENSMUST00000223173 649 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm25582-201ENSMUST00000083412 110 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Mir465-201ENSMUST00000093563 74 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm37956-201ENSMUST00000195208 2010 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Smcr8-202ENSMUST00000102667 3544 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Gm5386-201ENSMUST00000121749 2450 ntBASIC7.89□□□□□ -1.15
Clp1Q99LI9 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Clp1Q99LI9 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm20679-201ENSMUST00000177285 1402 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm26417-201ENSMUST00000104274 135 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm8662-201ENSMUST00000118644 574 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Mir1900-201ENSMUST00000122714 78 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm16298-201ENSMUST00000161107 420 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm26991-201ENSMUST00000180950 620 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm26784-201ENSMUST00000181666 410 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm4412-201ENSMUST00000186660 433 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm29464-201ENSMUST00000187692 513 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm28070-201ENSMUST00000191502 445 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm17935-201ENSMUST00000196649 772 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.88□□□□□ -1.15
Clp1Q99LI9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm45900-201ENSMUST00000211879 409 ntBASIC7.88□□□□□ -1.15
Clp1Q99LI9 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms