Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm6884-201ENSMUST00000119318 615 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44463-201ENSMUST00000198895 137 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm25724-201ENSMUST00000104531 117 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm7821-201ENSMUST00000117111 788 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13311-201ENSMUST00000117863 379 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm9439-201ENSMUST00000119554 973 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm15362-201ENSMUST00000121459 388 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm25969-201ENSMUST00000157166 132 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm24781-201ENSMUST00000157636 117 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm22701-201ENSMUST00000175371 291 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm24756-201ENSMUST00000177002 96 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm27001-201ENSMUST00000182252 936 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm27037-201ENSMUST00000182270 960 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Mir6362-201ENSMUST00000184329 107 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm18501-201ENSMUST00000185363 664 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm28195-201ENSMUST00000186992 372 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17997-201ENSMUST00000211801 840 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.47□□□□□ -1.37
Ccdc28bQ8CEG5 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Ccdc28bQ8CEG5 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms