Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm24790-201ENSMUST00000104285 132 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm24888-201ENSMUST00000104387 130 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm14631-201ENSMUST00000119067 594 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm11504-201ENSMUST00000120211 173 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm15750-201ENSMUST00000120970 616 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm6434-201ENSMUST00000163316 372 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm43396-201ENSMUST00000197506 706 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm43576-201ENSMUST00000197937 871 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm8190-201ENSMUST00000199603 586 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm43459-201ENSMUST00000202093 331 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm44227-201ENSMUST00000203576 241 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm21054-201ENSMUST00000203981 380 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm24036-201ENSMUST00000082868 156 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm26422-201ENSMUST00000104276 132 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm25344-201ENSMUST00000104503 132 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm7821-201ENSMUST00000117111 788 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm14755-201ENSMUST00000118037 384 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm6382-201ENSMUST00000118873 942 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm25435-201ENSMUST00000158277 267 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm23259-201ENSMUST00000158318 303 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm18833-201ENSMUST00000173218 862 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm27185-201ENSMUST00000184296 247 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm27782-201ENSMUST00000185059 199 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm42464-202ENSMUST00000198111 774 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm7780-201ENSMUST00000214787 406 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm5928-201ENSMUST00000221839 466 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.72□□□□□ -1.33
Trub1Q8C0D0 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms