Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm13352-201ENSMUST00000117515 262 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm4997-201ENSMUST00000154056 360 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Mir1960-201ENSMUST00000157488 78 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm23225-201ENSMUST00000158121 114 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm3076-201ENSMUST00000161613 451 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Mir7653-201ENSMUST00000184358 61 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm38122-201ENSMUST00000192679 885 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm36939-201ENSMUST00000194889 439 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm7058-201ENSMUST00000119209 902 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm14054-201ENSMUST00000120744 704 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm10925-201ENSMUST00000189941 678 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm17917-201ENSMUST00000218561 953 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx55Q6ZPL9 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
Ddx55Q6ZPL9 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Gm12262-201ENSMUST00000119915 305 ntBASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Gm12630-201ENSMUST00000121575 784 ntBASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Gm25374-201ENSMUST00000158158 101 ntBASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Mir7235-201ENSMUST00000183796 56 ntBASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Gm27507-201ENSMUST00000184199 93 ntBASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx55Q6ZPL9 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms