Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm13455-201ENSMUST00000118767 517 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm42580-201ENSMUST00000197223 753 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Mir143-201ENSMUST00000083511 63 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.16□□□□□ -1.42
Spg11Q3UHA3 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm16074-201ENSMUST00000119524 444 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm14038-201ENSMUST00000121500 807 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm25152-201ENSMUST00000157117 114 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Mir5121-201ENSMUST00000198528 74 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm18980-201ENSMUST00000199098 1079 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Gm5229-201ENSMUST00000039375 354 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.15□□□□□ -1.42
Spg11Q3UHA3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Spg11Q3UHA3 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Klf10-202ENSMUST00000226363 2917 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Gm23965-201ENSMUST00000157969 142 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Gm25690-201ENSMUST00000175439 77 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Gm5654-201ENSMUST00000217787 475 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Gm36262-201ENSMUST00000223274 499 ntBASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Spg11Q3UHA3 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm17076-201ENSMUST00000165185 1401 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm42576-201ENSMUST00000202336 2846 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm15422-201ENSMUST00000117453 541 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Mir3078-201ENSMUST00000175231 87 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm38226-201ENSMUST00000192207 521 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm37784-201ENSMUST00000193233 189 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm19035-202ENSMUST00000194575 959 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm43456-201ENSMUST00000202519 457 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm25587-201ENSMUST00000082498 166 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Spg11Q3UHA3 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.14□□□□□ -1.43
Spg11Q3UHA3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms