Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ebf1Q07802 Gm23734-201ENSMUST00000083753 109 ntBASIC7.24□□□□□ -1.25
Ebf1Q07802 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.24□□□□□ -1.25
Ebf1Q07802 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.24□□□□□ -1.25
Ebf1Q07802 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.24□□□□□ -1.25
Ebf1Q07802 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.24□□□□□ -1.25
Ebf1Q07802 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.24□□□□□ -1.25
Ebf1Q07802 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ebf1Q07802 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ebf1Q07802 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ebf1Q07802 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm12387-201ENSMUST00000118573 955 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm16026-205ENSMUST00000162923 641 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm17022-201ENSMUST00000166415 922 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Mir7046-201ENSMUST00000183435 66 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm28416-201ENSMUST00000188334 292 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43033-201ENSMUST00000199682 425 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43036-201ENSMUST00000200594 373 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43967-201ENSMUST00000203787 301 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm7587-201ENSMUST00000207618 1021 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm45382-201ENSMUST00000210607 151 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.23□□□□□ -1.25
Ebf1Q07802 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Diaph3-206ENSMUST00000226745 713 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 AC156574.2-201ENSMUST00000228023 282 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Ebf1Q07802 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ebf1Q07802 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.23□□□□□ -1.25
Ebf1Q07802 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ebf1Q07802 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ebf1Q07802 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ebf1Q07802 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.22□□□□□ -1.25
Ebf1Q07802 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ebf1Q07802 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ebf1Q07802 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ebf1Q07802 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ebf1Q07802 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.22□□□□□ -1.25
Ebf1Q07802 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ebf1Q07802 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms