Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
CiitaP79621 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm26422-201ENSMUST00000104276 132 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm12439-201ENSMUST00000117162 365 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Gm15181-201ENSMUST00000120142 177 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm9064-201ENSMUST00000163579 566 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm29197-201ENSMUST00000185922 702 ntBASIC7.24□□□□□ -1.25
CiitaP79621 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.24□□□□□ -1.25
CiitaP79621 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Trbv9-201ENSMUST00000194494 290 ntBASIC7.24□□□□□ -1.25
CiitaP79621 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CiitaP79621 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CiitaP79621 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.24□□□□□ -1.25
CiitaP79621 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CiitaP79621 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CiitaP79621 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CiitaP79621 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.24□□□□□ -1.25
CiitaP79621 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.23□□□□□ -1.25
CiitaP79621 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
CiitaP79621 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Gm8534-201ENSMUST00000118553 766 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm13222-201ENSMUST00000119638 138 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm15596-201ENSMUST00000121139 784 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm14587-201ENSMUST00000121714 658 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm8648-201ENSMUST00000122457 221 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.23□□□□□ -1.25
CiitaP79621 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Gm23031-201ENSMUST00000157998 119 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm25550-201ENSMUST00000158079 128 ntBASIC7.23□□□□□ -1.25
CiitaP79621 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.23□□□□□ -1.25
CiitaP79621 Gm26238-201ENSMUST00000175538 117 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm18849-201ENSMUST00000189861 560 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Gm9710-201ENSMUST00000198053 499 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.23□□□□□ -1.25
CiitaP79621 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CiitaP79621 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.23□□□□□ -1.25
CiitaP79621 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CiitaP79621 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms