Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.42□□□□□ -1.38
Sox3P53784 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.42□□□□□ -1.38
Sox3P53784 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox3P53784 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Sox3P53784 Mir296-201ENSMUST00000083587 79 ntBASIC6.42□□□□□ -1.38
Sox3P53784 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm24924-201ENSMUST00000084007 164 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Olfr519-201ENSMUST00000084752 960 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sox3P53784 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.42□□□□□ -1.38
Sox3P53784 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Sox3P53784 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.41□□□□□ -1.38
Sox3P53784 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Snord88a-201ENSMUST00000116723 90 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Gm14712-201ENSMUST00000120195 772 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm25904-201ENSMUST00000158491 143 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm27601-201ENSMUST00000184794 127 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Gm36965-201ENSMUST00000193797 394 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Gm9710-201ENSMUST00000198053 499 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.41□□□□□ -1.38
Sox3P53784 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox3P53784 Gm7499-201ENSMUST00000210423 813 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Gm19195-201ENSMUST00000222018 511 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.41□□□□□ -1.38
Sox3P53784 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox3P53784 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Sox3P53784 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox3P53784 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.41□□□□□ -1.38
Sox3P53784 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Sox3P53784 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms