Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Sox1P53783 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Sox1P53783 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm23311-201ENSMUST00000104152 134 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm15159-201ENSMUST00000117062 764 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm11984-201ENSMUST00000118142 766 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm12099-201ENSMUST00000118660 750 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm12090-201ENSMUST00000118692 758 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm11357-201ENSMUST00000119758 954 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm16053-201ENSMUST00000120511 188 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.58□□□□□ -1.2
Sox1P53783 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm25839-201ENSMUST00000158921 103 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC7.58□□□□□ -1.2
Sox1P53783 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Sox1P53783 Mir7008-201ENSMUST00000184398 63 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm28801-201ENSMUST00000188761 449 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm8101-201ENSMUST00000192796 478 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm45279-201ENSMUST00000210315 391 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm7499-201ENSMUST00000210423 813 ntBASIC7.58□□□□□ -1.2
Sox1P53783 AC122372.1-201ENSMUST00000215344 280 ntBASIC7.58□□□□□ -1.2
Sox1P53783 AC162467.1-201ENSMUST00000220254 621 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm9973-202ENSMUST00000220926 166 ntBASIC7.58□□□□□ -1.2
Sox1P53783 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.58□□□□□ -1.2
Sox1P53783 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.58□□□□□ -1.2
Sox1P53783 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Mir106b-201ENSMUST00000083580 82 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Sox1P53783 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Sox1P53783 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Sox1P53783 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Sox1P53783 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Sox1P53783 Gm13352-201ENSMUST00000117515 262 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm13607-201ENSMUST00000117875 539 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm14712-201ENSMUST00000120195 772 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm12313-201ENSMUST00000121347 421 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm12101-201ENSMUST00000121590 390 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm9428-201ENSMUST00000127214 769 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.57□□□□□ -1.2
Sox1P53783 Gm22555-201ENSMUST00000157801 62 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm7152-201ENSMUST00000163570 605 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm8540-201ENSMUST00000168952 732 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm22690-201ENSMUST00000175054 110 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm25246-201ENSMUST00000175476 69 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Mir7211-201ENSMUST00000184071 63 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.57□□□□□ -1.2
Sox1P53783 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC7.57□□□□□ -1.2
Sox1P53783 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.57□□□□□ -1.2
Sox1P53783 Gm44163-201ENSMUST00000205140 475 ntBASIC7.57□□□□□ -1.2
Sox1P53783 AC115047.1-201ENSMUST00000213795 322 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm17950-201ENSMUST00000214617 646 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.57□□□□□ -1.2
Sox1P53783 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm10126-201ENSMUST00000221732 168 ntBASIC7.57□□□□□ -1.2
Sox1P53783 AC079644.3-201ENSMUST00000222452 357 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm6575-201ENSMUST00000222946 697 ntBASIC7.57□□□□□ -1.2
Sox1P53783 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Sox1P53783 Olfr480-201ENSMUST00000071658 1029 ntBASIC7.57□□□□□ -1.2
Sox1P53783 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms