Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AL450321.1-201ENSMUST00000220600 3550 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 Grik1-210ENSMUST00000228034 2708 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Gm25917-201ENSMUST00000104267 130 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Gm5947-201ENSMUST00000179156 714 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Gm5645-201ENSMUST00000179597 714 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cux1P53564 Gm44833-201ENSMUST00000208368 331 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Gm7570-201ENSMUST00000215246 698 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC10.05□□□□□ -0.8
Cux1P53564 Gm18405-201ENSMUST00000220743 511 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cux1P53564 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC10.05□□□□□ -0.8
Cux1P53564 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cux1P53564 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.05□□□□□ -0.8
Cux1P53564 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cux1P53564 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cux1P53564 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Gm28583-201ENSMUST00000188903 2141 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gm38142-201ENSMUST00000194093 3555 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Gm25065-201ENSMUST00000177914 132 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gm25891-201ENSMUST00000180050 132 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gm7745-201ENSMUST00000182235 973 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Gm3544-201ENSMUST00000196129 305 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gm42619-201ENSMUST00000197564 1136 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC10.04□□□□□ -0.8
Cux1P53564 AC127242.4-201ENSMUST00000221242 470 ntBASIC10.04□□□□□ -0.8
Cux1P53564 Gm36930-201ENSMUST00000195431 2376 ntBASIC10.04□□□□□ -0.8
Cux1P53564 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Cux1P53564 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC10.04□□□□□ -0.8
Cux1P53564 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Cux1P53564 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC10.04□□□□□ -0.8
Cux1P53564 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cux1P53564 Gm42507-201ENSMUST00000201187 2555 ntBASIC10.03□□□□□ -0.8
Cux1P53564 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cux1P53564 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Cux1P53564 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 Gm25459-201ENSMUST00000157953 114 ntBASIC10.03□□□□□ -0.8
Cux1P53564 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 Gm19560-201ENSMUST00000177510 514 ntBASIC10.03□□□□□ -0.8
Cux1P53564 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC10.03□□□□□ -0.8
Cux1P53564 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 CT030254.1-201ENSMUST00000225450 1078 ntBASIC10.03□□□□□ -0.8
Cux1P53564 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC10.03□□□□□ -0.8
Cux1P53564 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC10.03□□□□□ -0.8
Cux1P53564 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cux1P53564 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cux1P53564 Gm24989-201ENSMUST00000104461 88 ntBASIC10.02□□□□□ -0.8
Cux1P53564 Gm22714-201ENSMUST00000116894 78 ntBASIC10.02□□□□□ -0.8
Cux1P53564 M6pr-ps-201ENSMUST00000120481 830 ntBASIC10.02□□□□□ -0.8
Cux1P53564 Gm7931-201ENSMUST00000121537 271 ntBASIC10.02□□□□□ -0.8
Cux1P53564 Gm12396-201ENSMUST00000121600 306 ntBASIC10.02□□□□□ -0.8
Cux1P53564 Gm19033-201ENSMUST00000208516 964 ntBASIC10.02□□□□□ -0.8
Cux1P53564 CT485607.3-201ENSMUST00000213361 672 ntBASIC10.02□□□□□ -0.8
Cux1P53564 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cux1P53564 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms