Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm9027-201ENSMUST00000165914 661 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm21772-201ENSMUST00000169213 478 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm17126-201ENSMUST00000172276 523 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Rfx1P48377 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-7-201ENSMUST00000180364 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm27542-201ENSMUST00000184184 256 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm27755-201ENSMUST00000184623 132 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir6922-201ENSMUST00000185099 66 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Ighv5-21-201ENSMUST00000191935 295 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-6-201ENSMUST00000196127 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-12-201ENSMUST00000197274 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm10416-201ENSMUST00000197379 645 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-5-201ENSMUST00000197439 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-10-201ENSMUST00000197745 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-11-201ENSMUST00000197952 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-4-201ENSMUST00000198665 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-9-201ENSMUST00000200087 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mir669a-8-201ENSMUST00000200268 87 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm45454-201ENSMUST00000211484 455 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm45506-201ENSMUST00000211620 280 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm45789-201ENSMUST00000213038 364 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm18292-201ENSMUST00000216673 919 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.5□□□□□ -1.05
Rfx1P48377 A1cf-203ENSMUST00000224400 1204 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm37127-201ENSMUST00000192924 3036 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm45322-201ENSMUST00000211642 1361 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm37569-201ENSMUST00000192111 1722 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm13058-201ENSMUST00000117097 1435 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Rfx1P48377 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm13160-201ENSMUST00000118441 627 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm11991-201ENSMUST00000119652 1074 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm11385-201ENSMUST00000121513 570 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm8974-201ENSMUST00000175770 479 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm18397-201ENSMUST00000176704 587 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm28728-201ENSMUST00000189087 405 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm37578-201ENSMUST00000192256 1177 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm18752-201ENSMUST00000192876 608 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm18843-201ENSMUST00000194982 719 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm42489-201ENSMUST00000198964 669 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.49□□□□□ -1.05
Rfx1P48377 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC8.49□□□□□ -1.05
Rfx1P48377 AC111046.1-201ENSMUST00000217715 412 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.49□□□□□ -1.05
Rfx1P48377 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Rfx1P48377 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Gm25926-201ENSMUST00000082899 160 ntBASIC8.49□□□□□ -1.05
Rfx1P48377 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Rfx1P48377 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 122.4 ms