Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx2P43241 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm13265-201ENSMUST00000118090 421 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm12618-201ENSMUST00000121754 483 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm3076-201ENSMUST00000161613 451 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm37463-201ENSMUST00000193819 796 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm43392-201ENSMUST00000196560 434 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm44982-201ENSMUST00000208795 471 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm19212-201ENSMUST00000216642 862 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Gm9110-201ENSMUST00000219035 617 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdx2P43241 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm8526-201ENSMUST00000079153 475 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.35□□□□□ -1.39
Cdx2P43241 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Cdx2P43241 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx2P43241 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Malat1-201ENSMUST00000172812 6983 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm15186-201ENSMUST00000119345 563 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm23884-201ENSMUST00000122687 294 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdx2P43241 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm25374-201ENSMUST00000158158 101 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Gm9064-201ENSMUST00000163579 566 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms