Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm37444-201ENSMUST00000193605 439 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm37676-201ENSMUST00000195496 507 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm43689-201ENSMUST00000195951 427 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC5.22□□□□□ -1.57
Rom1P32958 Gm4410-201ENSMUST00000199349 686 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC5.22□□□□□ -1.57
Rom1P32958 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.22□□□□□ -1.57
Rom1P32958 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Rom1P32958 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 AV026068-220ENSMUST00000224153 1147 ntBASIC5.22□□□□□ -1.57
Rom1P32958 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.22□□□□□ -1.57
Rom1P32958 AC125087.1-201ENSMUST00000227552 514 ntBASIC5.22□□□□□ -1.57
Rom1P32958 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm5815-201ENSMUST00000050706 1185 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Rom1P32958 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rom1P32958 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rom1P32958 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.22□□□□□ -1.57
Rom1P32958 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Rom1P32958 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Rom1P32958 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rom1P32958 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rom1P32958 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.22□□□□□ -1.57
Rom1P32958 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.22□□□□□ -1.57
Rom1P32958 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rom1P32958 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Rom1P32958 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Rom1P32958 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Rom1P32958 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.57
Rom1P32958 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Rom1P32958 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Rom1P32958 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Rom1P32958 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rom1P32958 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 Gm6746-201ENSMUST00000108774 483 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm14248-201ENSMUST00000117790 544 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm6620-201ENSMUST00000120113 715 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm14900-201ENSMUST00000120304 733 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm11925-201ENSMUST00000121375 535 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC5.21□□□□□ -1.58
Rom1P32958 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm22885-201ENSMUST00000157410 107 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm25437-201ENSMUST00000158282 132 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Rom1P32958 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm24307-201ENSMUST00000178512 101 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm8245-201ENSMUST00000182434 987 ntBASIC5.21□□□□□ -1.58
Rom1P32958 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm6610-201ENSMUST00000186324 358 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm37678-201ENSMUST00000192908 1146 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.21□□□□□ -1.58
Rom1P32958 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.21□□□□□ -1.58
Rom1P32958 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Gm44623-201ENSMUST00000207934 434 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.21□□□□□ -1.58
Rom1P32958 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.21□□□□□ -1.58
Rom1P32958 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Rom1P32958 AC124715.1-201ENSMUST00000228480 754 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rom1P32958 Desi2-202ENSMUST00000069568 1193 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rom1P32958 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rom1P32958 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rom1P32958 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rom1P32958 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Rom1P32958 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rom1P32958 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.21□□□□□ -1.58
Rom1P32958 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.21□□□□□ -1.58
Rom1P32958 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms