Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sdc1P18828 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sdc1P18828 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.28□□□□□ -1.56
Sdc1P18828 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Sdc1P18828 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sdc1P18828 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm15484-201ENSMUST00000118871 828 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm15188-201ENSMUST00000121264 704 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm13462-201ENSMUST00000121472 961 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC5.27□□□□□ -1.57
Sdc1P18828 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm4835-201ENSMUST00000155839 972 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
Sdc1P18828 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm22702-201ENSMUST00000175372 69 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Mir6362-201ENSMUST00000184329 107 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm37383-201ENSMUST00000191750 745 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm38079-201ENSMUST00000195603 154 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm19185-201ENSMUST00000196365 643 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm44285-201ENSMUST00000203557 940 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm2225-201ENSMUST00000209570 377 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 AC134607.1-201ENSMUST00000214707 485 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 CT572999.1-201ENSMUST00000220315 1260 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 CT025630.2-201ENSMUST00000228293 487 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm21731-201ENSMUST00000079524 489 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.27□□□□□ -1.57
Sdc1P18828 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Sdc1P18828 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sdc1P18828 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sdc1P18828 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm14032-201ENSMUST00000117686 1026 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Gm6884-201ENSMUST00000119318 615 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC5.26□□□□□ -1.57
Sdc1P18828 Gm24359-201ENSMUST00000158418 221 ntBASIC5.26□□□□□ -1.57
Sdc1P18828 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms