Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Mir678-201ENSMUST00000102114 84 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm25877-201ENSMUST00000104326 129 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm12135-201ENSMUST00000119170 466 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm7113-201ENSMUST00000120477 958 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm11434-201ENSMUST00000122379 629 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm7613-201ENSMUST00000139070 487 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Chmp6P0C0A3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm43229-201ENSMUST00000201812 1850 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm25760-201ENSMUST00000103989 132 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm12842-201ENSMUST00000117298 476 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm20615-201ENSMUST00000177503 705 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm28665-201ENSMUST00000189269 670 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm7019-201ENSMUST00000194122 369 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm6077-201ENSMUST00000196008 499 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Gm44705-201ENSMUST00000206719 339 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 AC153936.1-201ENSMUST00000219874 395 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Chmp6P0C0A3 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Chmp6P0C0A3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Chmp6P0C0A3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Chmp6P0C0A3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Chmp6P0C0A3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Chmp6P0C0A3 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Gm12573-201ENSMUST00000118158 286 ntBASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Gm12375-201ENSMUST00000119331 921 ntBASIC7.14□□□□□ -1.27
Chmp6P0C0A3 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Gm5843-201ENSMUST00000121631 476 ntBASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Gm12175-201ENSMUST00000122081 345 ntBASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Chmp6P0C0A3 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms