Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TcraP01849 Gm43637-201ENSMUST00000202206 2926 ntBASIC4.77□□□□□ -1.65
TcraP01849 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TcraP01849 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Gm43031-201ENSMUST00000198500 1887 ntBASIC4.77□□□□□ -1.65
TcraP01849 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TcraP01849 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC4.77□□□□□ -1.65
TcraP01849 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC4.77□□□□□ -1.65
TcraP01849 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.77□□□□□ -1.65
TcraP01849 Gm45297-201ENSMUST00000209893 3483 ntBASIC4.77□□□□□ -1.65
TcraP01849 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
TcraP01849 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC4.77□□□□□ -1.65
TcraP01849 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TcraP01849 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm10388-201ENSMUST00000205001 2936 ntBASIC4.76□□□□□ -1.65
TcraP01849 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC4.76□□□□□ -1.65
TcraP01849 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.76□□□□□ -1.65
TcraP01849 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC4.76□□□□□ -1.65
TcraP01849 Gm15425-201ENSMUST00000119013 2711 ntBASIC4.76□□□□□ -1.65
TcraP01849 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.76□□□□□ -1.65
TcraP01849 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 AC117608.1-201ENSMUST00000225500 3418 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.76□□□□□ -1.65
TcraP01849 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TcraP01849 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
TcraP01849 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm12740-201ENSMUST00000118794 308 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm8401-201ENSMUST00000120248 1739 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm15188-201ENSMUST00000121264 704 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm14990-201ENSMUST00000122354 445 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC4.76□□□□□ -1.65
TcraP01849 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm16260-201ENSMUST00000155141 304 ntBASIC4.76□□□□□ -1.65
TcraP01849 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm7991-201ENSMUST00000168668 591 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm6536-201ENSMUST00000171180 615 ntBASIC4.76□□□□□ -1.65
TcraP01849 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm29354-201ENSMUST00000187613 696 ntBASIC4.76□□□□□ -1.65
TcraP01849 Ighv1-10-201ENSMUST00000194372 355 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm43656-201ENSMUST00000197882 434 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm43108-201ENSMUST00000200525 293 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm44380-201ENSMUST00000203125 293 ntBASIC4.76□□□□□ -1.65
TcraP01849 Gm44760-201ENSMUST00000206375 1173 ntBASIC4.76□□□□□ -1.65
TcraP01849 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC4.76□□□□□ -1.65
TcraP01849 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC4.76□□□□□ -1.65
TcraP01849 Gm45693-201ENSMUST00000211391 1157 ntBASIC4.76□□□□□ -1.65
TcraP01849 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Gm19217-201ENSMUST00000218238 328 ntBASIC4.76□□□□□ -1.65
TcraP01849 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
TcraP01849 AC153937.1-201ENSMUST00000218734 412 ntBASIC4.76□□□□□ -1.65
TcraP01849 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 CT009556.4-201ENSMUST00000227092 200 ntBASIC4.76□□□□□ -1.65
TcraP01849 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Gm5341-201ENSMUST00000058881 489 ntBASIC4.76□□□□□ -1.65
TcraP01849 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.76□□□□□ -1.65
TcraP01849 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
TcraP01849 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TcraP01849 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Gm42881-201ENSMUST00000198636 3344 ntBASIC4.76□□□□□ -1.65
TcraP01849 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
TcraP01849 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TcraP01849 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TcraP01849 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TcraP01849 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TcraP01849 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms