Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm25717-201ENSMUST00000158631 353 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm20615-201ENSMUST00000177503 705 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm25244-201ENSMUST00000178089 132 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Mir6244-201ENSMUST00000184156 117 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm28620-201ENSMUST00000190463 439 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm43689-201ENSMUST00000195951 427 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
Srp54bE9PXC0 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm5793-201ENSMUST00000119393 630 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm15750-201ENSMUST00000120970 616 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm23891-201ENSMUST00000158114 138 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm3140-201ENSMUST00000163523 481 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm4152-201ENSMUST00000172675 259 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Mir199b-201ENSMUST00000175066 110 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm27152-201ENSMUST00000183828 99 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm32983-201ENSMUST00000208500 505 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm4556-201ENSMUST00000217808 355 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm7986-201ENSMUST00000221336 551 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Srp54bE9PXC0 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.65□□□□□ -1.35
Srp54bE9PXC0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Srp54bE9PXC0 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Srp54bE9PXC0 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Srp54bE9PXC0 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Srp54bE9PXC0 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Srp54bE9PXC0 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Srp54bE9PXC0 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Srp54bE9PXC0 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 141.1 ms