Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm22210-201ENSMUST00000158101 144 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Mir3090-201ENSMUST00000175597 87 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm19231-201ENSMUST00000193212 830 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm44265-201ENSMUST00000203631 465 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm45750-201ENSMUST00000211966 354 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm9293-201ENSMUST00000223096 306 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm4997-201ENSMUST00000154056 360 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm25824-201ENSMUST00000157092 121 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm22724-201ENSMUST00000158091 127 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm28023-201ENSMUST00000184556 60 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm27825-201ENSMUST00000184586 60 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm9535-201ENSMUST00000218499 768 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm24924-201ENSMUST00000084007 164 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm15149-201ENSMUST00000119370 360 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm8581-201ENSMUST00000188636 890 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm28883-201ENSMUST00000189256 369 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm4510-201ENSMUST00000218265 427 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a4A2AX52 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.56□□□□□ -1.52
Col6a4A2AX52 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms