Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vstm4T1NXB5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Gm6139-201ENSMUST00000079261 882 ntBASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vstm4T1NXB5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vstm4T1NXB5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vstm4T1NXB5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vstm4T1NXB5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Gm27454-201ENSMUST00000185090 204 ntBASIC19.68■□□□□ 0.74
Vstm4T1NXB5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vstm4T1NXB5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Gm8969-201ENSMUST00000199694 526 ntBASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Vstm4T1NXB5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms