Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cldn9Q9Z0S7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn9Q9Z0S7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Gm8495-201ENSMUST00000188740 694 ntBASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cldn9Q9Z0S7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn9Q9Z0S7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Fst-202ENSMUST00000223640 2612 ntBASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn9Q9Z0S7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Tgds-204ENSMUST00000228543 1594 ntBASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn9Q9Z0S7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cldn9Q9Z0S7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn9Q9Z0S7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms