Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcb1Q9Z0H3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcb1Q9Z0H3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarcb1Q9Z0H3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcb1Q9Z0H3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcb1Q9Z0H3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcb1Q9Z0H3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcb1Q9Z0H3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcb1Q9Z0H3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smarcb1Q9Z0H3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms