Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Gm10252-201ENSMUST00000209541 832 ntBASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn8aQ9WTU3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Gm37292-201ENSMUST00000192062 758 ntBASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scn8aQ9WTU3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn8aQ9WTU3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.35■□□□□ 0.53
Scn8aQ9WTU3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn8aQ9WTU3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn8aQ9WTU3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.33■□□□□ 0.52
Scn8aQ9WTU3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn8aQ9WTU3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn8aQ9WTU3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn8aQ9WTU3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms