Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn2Q9R0A1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Gm7514-201ENSMUST00000209475 934 ntBASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Clcn2Q9R0A1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn2Q9R0A1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn2Q9R0A1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn2Q9R0A1 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.52■□□□□ 0.55
Clcn2Q9R0A1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn2Q9R0A1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn2Q9R0A1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn2Q9R0A1 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.5■□□□□ 0.55
Clcn2Q9R0A1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn2Q9R0A1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn2Q9R0A1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.5■□□□□ 0.55
Clcn2Q9R0A1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn2Q9R0A1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn2Q9R0A1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 152 ms