Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Nubp1Q9R060 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Gm10517-202ENSMUST00000192970 758 ntBASIC15.84■□□□□ 0.13
Nubp1Q9R060 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.84■□□□□ 0.13
Nubp1Q9R060 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nubp1Q9R060 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nubp1Q9R060 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Gm13559-201ENSMUST00000120476 863 ntBASIC15.83■□□□□ 0.12
Nubp1Q9R060 Gm43930-201ENSMUST00000203868 845 ntBASIC15.83■□□□□ 0.12
Nubp1Q9R060 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.83■□□□□ 0.12
Nubp1Q9R060 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Nubp1Q9R060 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.83■□□□□ 0.12
Nubp1Q9R060 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nubp1Q9R060 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Gm11927-201ENSMUST00000118472 759 ntBASIC15.82■□□□□ 0.12
Nubp1Q9R060 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Nubp1Q9R060 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.82■□□□□ 0.12
Nubp1Q9R060 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.82■□□□□ 0.12
Nubp1Q9R060 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nubp1Q9R060 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Gm37102-201ENSMUST00000195740 1105 ntBASIC15.8■□□□□ 0.12
Nubp1Q9R060 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.8■□□□□ 0.12
Nubp1Q9R060 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.8■□□□□ 0.12
Nubp1Q9R060 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms