Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf4Q9QZS2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Gm15820-201ENSMUST00000201566 728 ntBASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf4Q9QZS2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf4Q9QZS2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf4Q9QZS2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.34■□□□□ 0.53
Rnf4Q9QZS2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf4Q9QZS2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rnf4Q9QZS2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Gm7417-201ENSMUST00000192950 473 ntBASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf4Q9QZS2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf4Q9QZS2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms