Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Gm12896-201ENSMUST00000118430 226 ntBASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Gm2559-201ENSMUST00000201323 363 ntBASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr2e3Q9QXZ7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr2e3Q9QXZ7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nr2e3Q9QXZ7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.58■□□□□ 0.88
Nr2e3Q9QXZ7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr2e3Q9QXZ7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr2e3Q9QXZ7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Dio3-201ENSMUST00000097228 1449 ntBASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr2e3Q9QXZ7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr2e3Q9QXZ7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr2e3Q9QXZ7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr2e3Q9QXZ7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Fst-202ENSMUST00000223640 2612 ntBASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Flg-201ENSMUST00000050758 1488 ntBASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Tgds-204ENSMUST00000228543 1594 ntBASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr2e3Q9QXZ7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Zfp783-201ENSMUST00000095946 670 ntBASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e3Q9QXZ7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr2e3Q9QXZ7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Nr2e3Q9QXZ7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Gm11927-201ENSMUST00000118472 759 ntBASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Gm27275-201ENSMUST00000184318 272 ntBASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e3Q9QXZ7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nr2e3Q9QXZ7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e3Q9QXZ7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e3Q9QXZ7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e3Q9QXZ7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e3Q9QXZ7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms