Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm7514-201ENSMUST00000209475 934 ntBASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a2Q9JLR1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a2Q9JLR1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Gm29257-201ENSMUST00000186115 639 ntBASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a2Q9JLR1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Sec61a2Q9JLR1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Sec61a2Q9JLR1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sec61a2Q9JLR1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sec61a2Q9JLR1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sec61a2Q9JLR1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Gm13534-201ENSMUST00000121169 513 ntBASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sec61a2Q9JLR1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Nespas-201ENSMUST00000143738 1083 ntBASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms