Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.25■□□□□ 0.67
Rfx5Q9JL61 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.24■□□□□ 0.67
Rfx5Q9JL61 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx5Q9JL61 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Fst-202ENSMUST00000223640 2612 ntBASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Rfx5Q9JL61 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Rfx5Q9JL61 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Gm20760-201ENSMUST00000179197 648 ntBASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx5Q9JL61 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx5Q9JL61 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms