Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn3Q9ES97 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn3Q9ES97 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn3Q9ES97 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Nespas-201ENSMUST00000143738 1083 ntBASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Gm6420-201ENSMUST00000193885 723 ntBASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn3Q9ES97 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.34■□□□□ 0.69
Rtn3Q9ES97 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn3Q9ES97 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Gm6365-201ENSMUST00000054711 744 ntBASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn3Q9ES97 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtn3Q9ES97 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn3Q9ES97 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rtn3Q9ES97 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms