Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps35Q9EQH3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.17■□□□□ 0.5
Vps35Q9EQH3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps35Q9EQH3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps35Q9EQH3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps35Q9EQH3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps35Q9EQH3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps35Q9EQH3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vps35Q9EQH3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vps35Q9EQH3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vps35Q9EQH3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Gm5408-201ENSMUST00000197998 747 ntBASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps35Q9EQH3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms