Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a3bpQ9EQG9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Col4a3bpQ9EQG9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Col4a3bpQ9EQG9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a3bpQ9EQG9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a3bpQ9EQG9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Gm6420-201ENSMUST00000193885 723 ntBASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a3bpQ9EQG9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a3bpQ9EQG9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Tgds-204ENSMUST00000228543 1594 ntBASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a3bpQ9EQG9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Nespas-201ENSMUST00000143738 1083 ntBASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a3bpQ9EQG9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a3bpQ9EQG9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a3bpQ9EQG9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Col4a3bpQ9EQG9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a3bpQ9EQG9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a3bpQ9EQG9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a3bpQ9EQG9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms