Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Gm26524-201ENSMUST00000192339 390 ntBASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.07■□□□□ 0.48
Nif3l1Q9EQ80 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Gm5408-201ENSMUST00000197998 747 ntBASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nif3l1Q9EQ80 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nif3l1Q9EQ80 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Rab3c-203ENSMUST00000224180 967 ntBASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nif3l1Q9EQ80 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nif3l1Q9EQ80 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nif3l1Q9EQ80 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nif3l1Q9EQ80 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nif3l1Q9EQ80 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nif3l1Q9EQ80 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nif3l1Q9EQ80 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Nif3l1Q9EQ80 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms