Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2aQ9DB34 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2aQ9DB34 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.98■□□□□ 0.63
Chmp2aQ9DB34 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2aQ9DB34 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chmp2aQ9DB34 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.98■□□□□ 0.63
Chmp2aQ9DB34 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp2aQ9DB34 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2aQ9DB34 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chmp2aQ9DB34 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2aQ9DB34 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Gm26524-201ENSMUST00000192339 390 ntBASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2aQ9DB34 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chmp2aQ9DB34 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Rab3c-203ENSMUST00000224180 967 ntBASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms