Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Gm26524-201ENSMUST00000192339 390 ntBASIC19.34■□□□□ 0.69
Gm3404Q9D506 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.34■□□□□ 0.69
Gm3404Q9D506 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.34■□□□□ 0.69
Gm3404Q9D506 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm3404Q9D506 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gm3404Q9D506 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Rab3c-203ENSMUST00000224180 967 ntBASIC19.32■□□□□ 0.68
Gm3404Q9D506 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.32■□□□□ 0.68
Gm3404Q9D506 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm3404Q9D506 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3404Q9D506 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm3404Q9D506 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.31■□□□□ 0.68
Gm3404Q9D506 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.31■□□□□ 0.68
Gm3404Q9D506 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3404Q9D506 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.3■□□□□ 0.68
Gm3404Q9D506 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.3■□□□□ 0.68
Gm3404Q9D506 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3404Q9D506 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.29■□□□□ 0.68
Gm3404Q9D506 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.29■□□□□ 0.68
Gm3404Q9D506 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.29■□□□□ 0.68
Gm3404Q9D506 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Gm4968-201ENSMUST00000071458 858 ntBASIC19.29■□□□□ 0.68
Gm3404Q9D506 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3404Q9D506 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3404Q9D506 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm3404Q9D506 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3404Q9D506 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm3404Q9D506 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3404Q9D506 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm3404Q9D506 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms