Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Gm18025-201ENSMUST00000221733 862 ntBASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Stag1Q9D3E6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Stag1Q9D3E6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Stag1Q9D3E6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Stag1Q9D3E6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Stag1Q9D3E6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Gm42545-201ENSMUST00000202755 922 ntBASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Stag1Q9D3E6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.68■■□□□ 1.06
Stag1Q9D3E6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Stag1Q9D3E6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Stag1Q9D3E6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Stag1Q9D3E6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.65■■□□□ 1.06
Stag1Q9D3E6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms